PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_15679-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 281aa    MW: 30699.3 Da    PI: 6.4037
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_15679-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09116164455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+  Er RR+ri +++  L++l+P +   ++    Ka iL + ++Y++sLq
  TRIUR3_15679-P1 116 SHSLSERVRRERISERMRMLQSLVPGC---DKVVTGKALILDEIINYVQSLQ 164
                      799************************...8888*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474594.19E-17110180IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.39E-10110168No hitNo description
PROSITE profilePS5088815.294112163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-6116164IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.5E-16116177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-10118169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MAGFSHLPQQ MEYGLTNAGS FLLCHGNPED APAAAAASRE GSSVVLDTPL VATASVEKKR  60
KPKEDTTSLN SAHSKETKES TRKRGGKKQG KEMDDDEEEP KGYIHVRARR GQATDSHSLS  120
ERVRRERISE RMRMLQSLVP GCDKVVTGKA LILDEIINYV QSLQNQVEFL SMRIASLSPV  180
VYGFGMESEA AFSDQSQKIE GMFHDAAALP TGPPMNRSSS PAPSQAMMDT GTSSSSPTYS  240
LQGTQDNGSS SSSYMMQTVG EPRHELFNQV VFSNYMCSFQ Q
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3654680.0AK365468.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2034G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238344.21e-153PREDICTED: transcription factor BEE 1-like isoform X1
RefseqXP_010238345.21e-153PREDICTED: transcription factor BEE 1-like isoform X1
TrEMBLT1MDE30.0T1MDE3_TRIUA; Uncharacterized protein
STRINGMLOC_16609.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23583791
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.24e-36bHLH family protein